What is included in the long-reads de novo genome bioinformatics package?

Arbor will perform read quality control and optional read pooling and perform de novo assembly with the industry-standard tool (Hifiasm). We can polish the assembly with short-read DNA sequencing data if desired. A summary of the assembly metrics and quality assessment will be provided along with the outputs. 

For de novo genome assembly, we provide contig-only assemblies. Raw methylation data will be delivered unless the methylation analysis bioinformatics package is also added to the project.