Ancient DNA diffuses from human bones to cave stones
…and stone deposits from this cave, we were able to: i) reconstruct the full human mitochondrial genome from the bones and the stones (same haplotype); ii) determine the sex of…
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New targets acquired: Improving locus recovery from the Angiosperms353 probe set
…by 29%. DISCUSSION Increasing the phylogenetic density of the target reference file results in improved recovery of target capture loci. The mega353 file and associated scripts are available at: https://github.com/chrisjackson-pellicle/NewTargets….
The phylogeny of Empis and Rhamphomyia (Diptera, Empididae) investigated using UCEs including an over 150 years old museum specimen
The genera Empis Linneus, 1758 and Rhamphomyia Meigen, 1822 (Empidoidea, Empididae Latreille, 1809) are two large genera of flies commonly named dagger flies. They are widely distributed in the world…
myBaits Expert Wheat Exome
…Comprehensive target—Probes target more than 200 Mbp of exonic genome space. Broad compatibility—The Wheat Exome panel is demonstrated to be compatible with Triticeae, Aegilops, Hordeum, and Secale species, and with…
myTags Custom Probes
…probes [ATTO 647N] and chromosomes [stained with Hoescht 33342] pseudo-colored gray. myTags probes enable super-resolution mapping of chromosomal spatial structures (Image credit: V. Schubert.) Oligo-FISH combined with spatial super-resolution structured…
Using natural history to guide supervised machine learning for cryptic species delimitation with genetic data
…morphology, mitochondrial, and sub-genomic (double-digest RADSeq and ultraconserved elements) data, we find high discordance across analyses and data types in the number of inferred species, with further evidence that multispecies…
Museum genomics provide insight into the extinction of a specialist North American warbler species
Museum genomics provide an opportunity to investigate population demographics of extinct species, especially valuable when research prior to extinction was minimal. The Bachman’s warbler (Vermivora bachmanii) is hypothesized to have…
Phylogenomic Analysis of Concatenated Ultraconserved Elements Reveals the Recent Evolutionary Radiation of the Fairy Wrasses (Teleostei: Labridae: Cirrhilabrus)
The fairy wrasses (genus Cirrhilabrus) are among the most successful of the extant wrasse lineages (Teleostei: Labridae), with their 61 species accounting for nearly 10% of the family. Although species…
Forensics & ancient DNA
…helps scientists in both research and industry settings overcome these challenges with solutions for sensitive, effective targeted NGS that: Enable sequencing of even extremely rare, damaged, and short molecules (…
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