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Whole-genome sequencing of Mycobacterium tuberculosis directly from clinical samples for high-resolution genomic epidemiology and drug resistance surveillance: an observational study
…different non-tuberculous mycobacteria and culture-negative for tuberculosis were used as controls in the qPCR assays and pre-sequencing runs. Additionally, 780 clinical isolates in the region of Comunidad Valenciana (Spain) were…
Pearl millet genomic vulnerability to climate change in West Africa highlights the need for regional collaboration
Replacement of local crops with alternative varieties adapted to future conditions may improve food security under climate change. Here the authors apply landscape genomics and ensemble climate modelling to pearl…
Palaeoclimate ocean conditions shaped the evolution of corals and their skeletons through deep time
Examining skeletal traits within a time-calibrated phylogeny, the authors find that ocean geochemistry (particularly aragonite–calcite seas) has driven patterns of morphological evolution in anthozoans (corals, sea anemones) over time.
Monkeypox virus emergence in wild chimpanzees reveals distinct clinical outcomes and viral diversity
…We also show that the carnivorous component of the Taï chimpanzees’ diet, mainly consisting of the sympatric monkeys they regularly hunt, did not change nor shift towards rodent consumption (the…
Identification of Rice Mutants with Altered Grain Alkali Digestion Trait
HyunJung Kim, Ralph Vin B. Imatong, Thomas H. Tai. Plant Breed. Biotech. 2020;8:19-27. https://doi.org/10.9787/PBB.2020.8.1.19
Identification of a Novel Papillomavirus Associated with Squamous Cell Carcinoma in a Domestic Cat
…the most common cutaneous malignancy of domestic cats, squamous cell carcinoma (SCC). Using total DNA sequencing we identified a novel feline papillomavirus in a nasal biopsy taken from a cat…
Genomic Epidemiology of the First Wave of SARS-CoV-2 in Italy
…a nationwide “lockdown” (8 March–3 June). These were combined with 460 published SARS-CoV-2 sequences sampled across Italy. Phylogenetic analysis including global sequence data revealed multiple independent introductions into Italy, with…